RetrogeneDB ID: | retro_tbel_2611 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_114106:36651..37157(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000009956 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.5 % |
Parental protein coverage: | 98.27 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVL-DWPFDD |
MN.PAPVEVTYKNMRFLITHNP.NATLNK.IEE.KKYGVTTIV.VCEA..DTTLVEKEGIHVL...PFDD | |
Retrocopy | MNHPAPVEVTYKNMRFLITHNPINATLNKLIEEPKKYGVTTIVGVCEAI*DTTLVEKEGIHVL>FCPFDD |
Parental | GAPPS-NQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGA- |
GAPPS.NQI.DDWLSLVKIKF.E.PG..IA.HCV.GLGRAPVLVALALIEGG.K..DAVQFIRQK..G.. | |
Retrocopy | GAPPS<NQIADDWLSLVKIKFHEDPGYYIAFHCVTGLGRAPVLVALALIEGGIK-*DAVQFIRQKWCGI< |
Parental | FNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCVQ |
F..KQLLYLE.YRPKM.L..KDS.GHRNNCCVQ | |
Retrocopy | FSNKQLLYLEEYRPKMQLHCKDSDGHRNNCCVQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |