RetrogeneDB ID: | retro_tbel_4074 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_64127:404..927(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000009956 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.63 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | MARMNRPAPVEVTYKNMRFLITH-NPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEK-EGIHV-LD |
MA.MN.PAPVEVTYKNMRFLI...NPTN.TL.KF.EELK.YG.TT.VR.CEATY.T.LVEK.EGIHV... | |
Retrocopy | MALMNCPAPVEVTYKNMRFLIMQ<NPTNMTLSKFTEELKRYGFTTVVRKCEATYNTALVEK<EGIHV<FN |
Parental | WPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAP--VLVALA-LIEGGMKYEDAVQFIR |
.PF.DGAPPSNQ..DDWLS.V.IKFREEPGC.IAVH.VA.LGRAP..V..AL....E..MK......FIR | |
Retrocopy | *PFHDGAPPSNQMADDWLSSVRIKFREEPGCRIAVHRVADLGRAPVLVVLALT>KVE*NMKMRGVLKFIR |
Parental | QKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCVQ |
QK.RGAFNSKQLLYLEKY..KM.L.FKDSNGHRNNCC.Q | |
Retrocopy | QKLRGAFNSKQLLYLEKYCSKM*LCFKDSNGHRNNCCIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |