RetrogeneDB ID: | retro_tbel_3295 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_136638:166927..167407(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTBEG00000009956 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.75 % |
Parental protein coverage: | 92.49 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPF |
M..MN.PAPVEVTYK.MRFLITH.PT..TLNKFIEELKKYGVTTIVRV.EATY...L..KE.IHVLD..F | |
Retrocopy | MT*MNCPAPVEVTYKIMRFLITHHPTKVTLNKFIEELKKYGVTTIVRVYEATYGHYLMKKEEIHVLD*RF |
Parental | DDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGA |
DDG.PPSNQIVD.WLS.VKIKF.EEPGCCIAV.CV.GLGRA.VLVALALIEGGM.Y.D.V...RQK..GA | |
Retrocopy | DDGTPPSNQIVDEWLSPVKIKFLEEPGCCIAVDCVPGLGRAAVLVALALIEGGMNYKDEV*LSRQKWHGA |
Parental | FNSKQLLYLEKYRPKMRLRF |
.NSKQL.Y..K.....RL.. | |
Retrocopy | SNSKQLWYCPKIQLRFRLQW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |