RetrogeneDB ID: | retro_tgut_4 | ||
Retrocopylocation | Organism: | Zebrafinch (Taeniopygia guttata) | |
Coordinates: | 23:2781059..2781797(-) | ||
Located in intron of: | ENSTGUG00000000971 | ||
Retrocopyinformation | Ensembl ID: | ENSTGUG00000018532 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTGUG00000012078 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 70.73 % |
Parental protein coverage: | 99.19 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MDKNELVQKAKLAEQAERYDDMASCMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
M..N..VQKAKLAEQAERY.DMA..MK.V.E.G.ELSNEERNLLSVAYKNVVG..RS.WRV.SSIE.KTE | |
Retrocopy | MARNHQVQKAKLAEQAERYEDMADFMKAVVEHGDELSNEERNLLSVAYKNVVGCQRSAWRVISSIEHKTE |
Parental | GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKG |
....K.Q...EYREK.E.EL...CN.VL.LL.K.LI...S..ESKVFYLKMKGDY.RYLAEVA.GDD... | |
Retrocopy | EGDDKAQVVNEYREKVEQELNAVCNNVLGLLDKYLIKKDSDTESKVFYLKMKGDYFRYLAEVASGDDRLS |
Parental | IVEQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEES |
..E..Q.AYQEA..ISKKEMQPT.PIRLGLALNFSVF.YEI.N.PE.A.SLAKT.FDEA...L.TLSE.S | |
Retrocopy | TIEKAQEAYQEAMDISKKEMQPTNPIRLGLALNFSVFHYEIANAPEQAISLAKTTFDEAMGDLHTLSEDS |
Parental | YKDSTLIMQLLRDNLTLWTSDTQG-DEAEAGEGGEN |
YKDSTLIMQLLRDNLTLWT....G.D..EAGE...N | |
Retrocopy | YKDSTLIMQLLRDNLTLWTAECAGEDGGEAGEEPKN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | RetrogeneDB ID |
---|---|
Gallus gallus | retro_ggal_3 |