Parental gene:

RPL19, ENSTBEG00000008077

Aliases:None
Description:ribosomal protein L19 [Source:HGNC Symbol;Acc:10312]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2939:79298..82342(+)


>ENSTBEG00000008077
AGTATGCTCAGGCTTCAGAAGAGGCTTGCCTCTAGTGTCCTCCGCTGTGGCAAAAAGAAGGTCTGGTTGGACCCCAATGA
GACCAATGACCCTCCCAATGCCTCCCGTCAGCAGATCCGGAAGCTGATCAAGGATGGGTTGATCATCCGCAAGCCTGTGA
CTGTCCATTCCCGGGCTCGATGCCGGAAAAACACCTTGGCCCGCCGGAAGGGCAGGCATATGGGCATAGGTAAGCGAAAG
GGTACGGCCAATGCTAGAATGCCAGAGAAGGTCACCTGGATGAGGAGAATGAGGATCCTGCGCCGACTGCTCAGAAGATA
CCGGGAGTCTAAAAAGATTGACCGCCACATGTATCACAGCCTGTACCTGAAGGTGAAGGGGAATGTGTTCAAGAACAAGC
GGATTCTCATGGAGCACATCCACAAGCTGAAGGCAGACAAGGCCCGCAAGAAGCTCCTAGCAGACCAGGCTGAGGCCCGC
AGGTCTAAGACCAAGGAAGCACGCAAGCGCCGTGAGGAGCGTCTCCAGGCCAAGAAGGAAGAGATCATCAAGACTCTGTC
CAAAGAGGAAGAGACCAAGAAATAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002060 ortholog_one2one 5 retrogenes
retro_btau_1241, retro_btau_1254, retro_btau_1371, retro_btau_1480, retro_btau_761,
Callithrix jacchus ENSCJAG00000008520 possible_ortholog 4 retrogenes
retro_cjac_131, retro_cjac_220, retro_cjac_32, retro_cjac_64,
Microcebus murinus ENSMICG00000002663 ortholog_one2one 5 retrogenes
retro_mmur_1213, retro_mmur_231, retro_mmur_469, retro_mmur_520, retro_mmur_678,
Macaca mulatta ENSMMUG00000004235 possible_ortholog 2 retrogenes
retro_mmul_283, retro_mmul_63,
Nomascus leucogenys ENSNLEG00000000748 possible_ortholog 19 retrogenes
retro_nleu_1182, retro_nleu_1570, retro_nleu_1602, retro_nleu_1620, retro_nleu_1889, retro_nleu_2171, retro_nleu_2236, retro_nleu_2284, retro_nleu_2335, retro_nleu_2430, retro_nleu_2446, retro_nleu_2538, retro_nleu_2695, retro_nleu_2702, retro_nleu_2735, retro_nleu_3116, retro_nleu_479, retro_nleu_540, retro_nleu_656,
Ochotona princeps ENSOPRG00000007092 ortholog_one2one 2 retrogenes
retro_opri_1220, retro_opri_987,
Procavia capensis ENSPCAG00000015228 ortholog_one2one 1 retrogene
retro_pcap_141,
Pongo abelii ENSPPYG00000008492 possible_ortholog 20 retrogenes
retro_pabe_1546, retro_pabe_1687, retro_pabe_1709, retro_pabe_1815, retro_pabe_2177, retro_pabe_2300, retro_pabe_2320, retro_pabe_2496, retro_pabe_2625, retro_pabe_2799, retro_pabe_2800, retro_pabe_3166, retro_pabe_3278, retro_pabe_3299, retro_pabe_3513, retro_pabe_3635, retro_pabe_3829, retro_pabe_4, retro_pabe_973, retro_pabe_980,
Rattus norvegicus ENSRNOG00000004741 possible_ortholog 37 retrogenes
retro_rnor_1029, retro_rnor_1039, retro_rnor_1295, retro_rnor_1338, retro_rnor_1405, retro_rnor_1440, retro_rnor_1449, retro_rnor_1478, retro_rnor_1512, retro_rnor_1525, retro_rnor_1558, retro_rnor_1577, retro_rnor_1765, retro_rnor_1766, retro_rnor_1795, retro_rnor_1814, retro_rnor_1860, retro_rnor_1885, retro_rnor_1905, retro_rnor_1907, retro_rnor_1970, retro_rnor_1981, retro_rnor_208, retro_rnor_2169, retro_rnor_2522, retro_rnor_2536, retro_rnor_2708, retro_rnor_2773, retro_rnor_2783, retro_rnor_2921, retro_rnor_2943, retro_rnor_326, retro_rnor_426, retro_rnor_434, retro_rnor_464, retro_rnor_465, retro_rnor_829,
Tarsius syrichta ENSTSYG00000008698 ortholog_one2one 10 retrogenes
retro_tsyr_1164, retro_tsyr_1267, retro_tsyr_1310, retro_tsyr_1330, retro_tsyr_1770, retro_tsyr_1916, retro_tsyr_540, retro_tsyr_713, retro_tsyr_782, retro_tsyr_93,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_173 63.13 100.00
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2. retro_tbel_199 68.36 89.18
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3. retro_tbel_759 83.33 86.08
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4. retro_tbel_799 77.97 59.79
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5. retro_tbel_835 79.61 51.55
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6. retro_tbel_867 67.26 85.57
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7. retro_tbel_957 79.90 100.00
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8. retro_tbel_988 56.64 57.22
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9. retro_tbel_1024 70.85 100.00
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10. retro_tbel_1150 82.82 83.51
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11. retro_tbel_1200 82.72 82.47
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12. retro_tbel_1248 81.51 60.82
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13. retro_tbel_1507 81.91 95.36
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14. retro_tbel_1620 80.95 95.88
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15. retro_tbel_1752 72.73 56.19
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16. retro_tbel_1791 60.63 65.46
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17. retro_tbel_1826 70.51 79.38
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18. retro_tbel_1942 81.43 71.65
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19. retro_tbel_2166 75.66 95.88
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20. retro_tbel_2529 91.79 100.00
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21. retro_tbel_2558 57.64 73.20
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22. retro_tbel_2687 91.28 100.00
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23. retro_tbel_2751 64.25 90.72
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24. retro_tbel_2855 82.72 96.39
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25. retro_tbel_3256 74.19 77.84
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26. retro_tbel_3347 75.68 55.67
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27. retro_tbel_3493 79.29 100.00
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28. retro_tbel_3758 52.35 85.57
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29. retro_tbel_4501 69.11 97.42
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30. retro_tbel_4606 78.77 89.18
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31. retro_tbel_4631 72.73 56.19
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Download FASTA sequences of all ENSTBEG00000008077 retrocopies