RetrogeneDB ID: | retro_tbel_2558 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_112904:81840..82261(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 57.64 % |
Parental protein coverage: | 73.2 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRES-KKIDRHMYHSL |
.T..S.A...KNTLA..K..HM.I.K.KG.ANAR.P.K....RRMRIL..LL.RY.E.....D.HM.HSL | |
Retrocopy | MTIYSWASSQKNTLAHQKSKHMIISKQKGIANARIPDKLICKRRMRILHQLLSRYYEF<LRFDYHMHHSL |
Parental | YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRR-EERLQAKKEEIIKTLSKEE |
YLKVKGN..KNK.ILMEH...L..D.A.KK.L.D..EA.RSKTK.A.K...E..LQ.KK...IKTL.K.E | |
Retrocopy | YLKVKGNMVKNKQILMEHVYRL*IDMAHKKFLID*TEAYRSKTKKALKHM<EKHLQSKK-DVIKTLLKKE |
Parental | ETKK |
E.KK | |
Retrocopy | ENKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |