RetrogeneDB ID: | retro_tbel_1248 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_424:164325..164679(-) | ||
Located in intron of: | ENSTBEG00000012092 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 81.51 % |
Parental protein coverage: | 60.82 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LASSVLRCGKKKVWLDPNETNDPPNA-SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG |
LASSVL.CGK.KVWLD.NETN...NA.S.Q.I.KL.K..LII.KPVTVHSRA.C.KNTLARRKGRHMGIG | |
Retrocopy | LASSVLHCGKQKVWLDSNETNEIANANSCQEIWKLNKNKLIICKPVTVHSRAPCQKNTLARRKGRHMGIG |
Parental | KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVK |
K.KGTANARMPEKVTWMRR..IL..LLRRYRES.KIDRHMYHSLYLKVK | |
Retrocopy | KQKGTANARMPEKVTWMRRKMIL*WLLRRYRES-KIDRHMYHSLYLKVK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |