RetrogeneDB ID: | retro_tbel_1791 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5748:184213..184588(-) | ||
Located in intron of: | ENSTBEG00000001468 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 60.63 % |
Parental protein coverage: | 65.46 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM |
..KGR..GIGK.KGTA.ARMPEKVT..RRMR.L..LLRR..ESKKID.H.YHSL.LKVKG.VFKNK.I.. | |
Retrocopy | KQKGRCTGIGKQKGTADARMPEKVT*TRRMRMLHLLLRRCHESKKIDSHRYHSLHLKVKGKVFKNKWIFK |
Parental | EHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK |
E.IH............A.QAEARR.KTKEARK..EE............LS.EEETKK | |
Retrocopy | EYIHN*RQTRLARSR-AQQAEARRCKTKEARKHSEEPPWPRRKRSSRLLS-EEETKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |