RetrogeneDB ID: | retro_tbel_1942 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_6045:454736..455150(-) | ||
Located in intron of: | ENSTBEG00000006793 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 81.43 % |
Parental protein coverage: | 71.65 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | SMLRLQKRLASSVLRCGKKKVWLDPNETNDPPNA-SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARR |
SMLRLQKRLASSVLRCGKK.V.LDPNETN...NA.S.QQI.KLIKDGL...KPVTV.S.A.C.KNTLA.R | |
Retrocopy | SMLRLQKRLASSVLRCGKK-V*LDPNETNAIANANSHQQIQKLIKDGLTVCKPVTVRSWAQCWKNTLACR |
Parental | KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEH |
KGRHMG.GK.KG.AN.RMPEKVTWMRRMRILRRLLRRYRESK.ID.HMYHSLYLKVKGNVFKNK.I...H | |
Retrocopy | KGRHMGTGK*KGMANTRMPEKVTWMRRMRILRRLLRRYRESK-IDCHMYHSLYLKVKGNVFKNKWIHGAH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |