RetrogeneDB ID: | retro_tbel_1826 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5835:66212..66669(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 70.51 % |
Parental protein coverage: | 79.38 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | KLIKDGLIIRKPVTVHSR-ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRE |
KL..DGLII.KPVTVHSR.A.C..NTLA..KG.H.GI..RKGT.NARMPEKVTW.R..RIL.RL.RR..E | |
Retrocopy | KLTQDGLIICKPVTVHSR<AWC*NNTLAC*KGKHTGIDQRKGTDNARMPEKVTWLRGGRILDRL-RRHWE |
Parental | SKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK |
SKKI..HMYHSLYLKV.GNVFKNKRIL.EH.HKLKADKA...LLAD..EARRSK..EA..R.EERLQAK. | |
Retrocopy | SKKIEGHMYHSLYLKVQGNVFKNKRILTEHVHKLKADKAHRQLLADLVEARRSKMREACRRHEERLQAKR |
Parental | -EEIIKTLSKEEETKK |
.EEIIKT........K | |
Retrocopy | <EEIIKTSRRKRPRNK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |