RetrogeneDB ID: | retro_tsyr_1770 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_57854:10555..11028(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTSYG00000008698 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 69.81 % |
Parental protein coverage: | 80.41 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKG-RHMGIGKRKGTANARMPEKVTWMRRMRILRRLLR |
QQI..LIKDGLIIRKPVTVH...R..KNT.ARRKG..HMGIGK.KGT.N..M.EKVTW...M.IL..LLR | |
Retrocopy | QQIWNLIKDGLIIRKPVTVHFWSRYQKNTFARRKG<QHMGIGKQKGTDNPWMSEKVTWRWSMSILHWLLR |
Parental | RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARRRREERL |
RY.ESKKID..M.HSLYLKVKGNV.KNK.ILMEHIHKL.ADKA.K.LL.D.AEA.RSK.KE..R..E..L | |
Retrocopy | RYCESKKIDCRMHHSLYLKVKGNVLKNKWILMEHIHKLEADKACKELLVDLAEAHRSKSKEVHRCIEKYL |
Parental | QAQKEQ--KTLSKEAETKK |
.A.KE....TLSK..ETKK | |
Retrocopy | RAKKEEIINTLSK*EETKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |