RetrogeneDB ID: | retro_tsyr_1916 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_66589:4123..4516(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTSYG00000008698 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 78.83 % |
Parental protein coverage: | 69.59 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | QQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEK-VTWMRRMRILRRLLR |
QQIRKLIKDGLII.KPVTVHSRARC..NTLA.RKGR..GIGK.K.....R.P.K.VT.M.RMRILRRLLR | |
Retrocopy | QQIRKLIKDGLIIHKPVTVHSRARCWRNTLAHRKGRYVGIGKPK----CRCPRK<VTCMGRMRILRRLLR |
Parental | RYRESKKIDR-HMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARRRR |
RYRESK.I.R.HMYHSLYLKVKGNVFKNK.ILM.HI.K.KAD...KKLLADQAEA.RSKTKEAR.RR | |
Retrocopy | RYRESKTIGR>HMYHSLYLKVKGNVFKNKQILMGHICK*KADETHKKLLADQAEACRSKTKEARKRR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |