RetrogeneDB ID: | retro_tbel_4631 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_9438:175768..176095(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 72.73 % |
Parental protein coverage: | 56.19 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | RLASSVLRCGKKKVWLDPNETNDPPNA-SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGI |
RLAS.VL.CG..KVWL.PNETN...NA.S.QQI.KLIK.GLIIRKPVT.HSRA....NTLARRK.RHMG. | |
Retrocopy | RLASQVLCCGNRKVWLVPNETNEIANANSHQQIWKLIKSGLIIRKPVTDHSRA*R*ENTLARRKDRHMGT |
Parental | GKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH |
G.RKGTA.ARMPEKVTW.RRMRI...L.RR..ES.K.DRH | |
Retrocopy | GGRKGTASARMPEKVTWKRRMRIPHWLPRRHWES-KTDRH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |