RetrogeneDB ID: | retro_tbel_835 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3122:384046..384343(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 79.61 % |
Parental protein coverage: | 51.55 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRI-LMEHIHKLKADK-ARKKLLADQAEARRS |
RRMRIL..LLRRY..S.KID.HMYHSLYLKVKGNVF.NK.I.LMEHIHKLKAD..A.KKLLAD..EA.RS | |
Retrocopy | RRMRILG*LLRRYHVSNKIDHHMYHSLYLKVKGNVFTNKQI<LMEHIHKLKADR<ACKKLLADLDEAHRS |
Parental | KTKEARKRREERLQAKK-EEIIKTLSKEEETKK |
KTKEARK..E..LQAKK.EEIIKTL.KEEETKK | |
Retrocopy | KTKEARKCCE*CLQAKK<EEIIKTLYKEEETKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |