RetrogeneDB ID: | retro_tbel_2751 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_118165:60442..60960(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL19 | ||
Ensembl ID: | ENSTBEG00000008077 | ||
Aliases: | None | ||
Description: | ribosomal protein L19 [Source:HGNC Symbol;Acc:10312] |
Percent Identity: | 64.25 % |
Parental protein coverage: | 90.72 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | KKVWLDPNETNDPPNASRQQ-IRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARM |
.KVWL.P.ET.....A.....I.....DGLII.KPVTVHS.A.C.K...A..KGR..GIGKRKGTANAR. | |
Retrocopy | EKVWLGPKETSETASANSHG>ISRN*SDGLIIHKPVTVHSWAQCWKSMMAHWKGRRGGIGKRKGTANARV |
Parental | PEKVTWMRRMRILRRLLRRYRES-KKIDRHMYHSLYLKVKGNVFKNKRILM-EHIHKLKADKARKKLLAD |
PEKVTWMR...IL..LLR.Y..S.KKID.H.YHSLYLKVK..V....RIL..EHI..LKAD.A..KLLAD | |
Retrocopy | PEKVTWMRTVKILSQLLRKYSDS<KKIDSHVYHSLYLKVKECV--QNRILT<EHILELKADQACRKLLAD |
Parental | QAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK |
QAEA..S.TKE.RKR.EERLQA.KE.I.K.LSKEEET.K | |
Retrocopy | QAEAKGSETKETRKRHEERLQA-KEGITKILSKEEETEK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |