RetrogeneDB ID: | retro_tsyr_1047 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_287802:304..781(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 68.1 % |
Parental protein coverage: | 64.08 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | SVTEQGAELSNEE-RNLLSVAYKNVVGARRSSWRVVSSIEQKTEGAE-KKQQMAREYREKIETELRDICN |
S...Q.AELSNE...NL..V.YKNVVGA.RSSWRV.SSIEQKTE.AE.KK.QM.REY.EK.ET.L.DICN | |
Retrocopy | SL*HQ*AELSNEV>TNLFLVTYKNVVGAHRSSWRVISSIEQKTEVAE>KKWQMIREYQEKTETKLKDICN |
Parental | DVLSLLEKFLIPNASQAESKV-FYLK-MKGDY-YRYLAEVAAGDDKKGIVDQSQQAYQEAFEI-SKKEMQ |
DV......FLIP.ASQAES...F.LK..KGDY.Y.Y.AE.AA.D.KK.IVDQ.Q.AYQEAFEI....EMQ | |
Retrocopy | DVQPFWKTFLIPSASQAESSL<FILK<IKGDYDYCYFAEIAAKDKKKVIVDQLQ*AYQEAFEIWXXXEMQ |
Parental | PTHPIRLGLALNFSVFYYEILNS |
.TH.I.L.L.LN.SVFYYEILNS | |
Retrocopy | STHSITLALTLNISVFYYEILNS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |