RetrogeneDB ID: | retro_tsyr_2022 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_80038:4669..5188(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 87.93 % |
Parental protein coverage: | 71.02 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
MDKNELVQKAKLAEQAERYDD.AAC.KS.TEQGAEL..EERNLLSVAYK.VVGARRSS.RVVS.IEQKTE | |
Retrocopy | MDKNELVQKAKLAEQAERYDDLAACVKSITEQGAELPHEERNLLSVAYKDVVGARRSSRRVVSRIEQKTE |
Parental | GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKG |
GAEKKQ.MA.EYREKIETELRDICNDVLSLLEKFLIP.ASQAESKVFYLKMK.D.Y..LAE.A.GDDKKG | |
Retrocopy | GAEKKQPMAQEYREKIETELRDICNDVLSLLEKFLIPSASQAESKVFYLKMKEDDYCCLAEIASGDDKKG |
Parental | IVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNF |
I..QS.QAYQE.FEISKKEMQPTHPIRLGLALNF | |
Retrocopy | IAEQS-QAYQEVFEISKKEMQPTHPIRLGLALNF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |