RetrogeneDB ID: | retro_tsyr_2085 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_88279:8189..8924(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 72.65 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
..K.EL.QKAKLAEQAERYDDMA.CMK..TEQGAELSNEERNLL.VAYKNV.G.RRS.WRV.SSI.Q.T. | |
Retrocopy | VEKTELIQKAKLAEQAERYDDMATCMKAATEQGAELSNEERNLLLVAYKNVAGVRRSAWRVISSIQQQTD |
Parental | GAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKG |
...KK........EK...ELR.IC..VL.LL.K.LI.NA...E.KVF.LKMKGDY.RYLAEV..GDD.K. | |
Retrocopy | ISGKKLRLIKD*GEKVDSELRTICTTVLELLDKYLIDNATNPECKVFHLKMKGDYFRYLAEVSCGDDLKQ |
Parental | IVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEES |
..D.SQ.AYQEAFEISKKEM.PTHPIRLGLALNFSVFYYEILN.PE.AC.LAK..FDEA.AELDTL...S | |
Retrocopy | TTDNSQGAYQEAFEISKKEMPPTHPIRLGLALNFSVFYYEILNKPELACTLAKMVFDEATAELDTLNDDS |
Parental | YKDSTLIMQLLRDNLTLWTSDTQGDEAEAGEGGEN |
YK.STLIMQLLRDNLTLWTSDT.G.E..A.EG.EN | |
Retrocopy | YKGSTLIMQLLRDNLTLWTSDTAGEECDAAEGAEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |