RetrogeneDB ID: | retro_tsyr_1473 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_456075:747..1182(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTSYG00000006537 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 78.62 % |
Parental protein coverage: | 58.94 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIR |
..LLDKYLI.NAT.PE.KVF.LKMKGDYFRYL.EV..GD....T..NSQ.AYQEAFEISKKEM.PTHPIR | |
Retrocopy | IQLLDKYLIDNATNPECKVFHLKMKGDYFRYLAEVSCGDDLKQTTDNSQGAYQEAFEISKKEMPPTHPIR |
Parental | LGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEG |
LGLALNFSVFYYEILN.PE.AC.LAK.AFDEA.AELDTLN..SYK.STLIMQLLRDNLTLWTS...G.E. | |
Retrocopy | LGLALNFSVFYYEILNKPELACTLAKMAFDEATAELDTLNDDSYKGSTLIMQLLRDNLTLWTSDTAGEEC |
Parental | DAGEG |
DA.EG | |
Retrocopy | DAAEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |