RetrogeneDB ID: | retro_tsyr_2066 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_85565:3659..4243(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 71.21 % |
Parental protein coverage: | 79.59 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYK-NVVGARRSSWRVVSSIE-QK |
M.KNELVQKA.L.EQ....DD..AC.KSV.EQ..ELSN.ER.L..V..K.N.VGARR.SWRV.SSI..QK | |
Retrocopy | MNKNELVQKA*LVEQTKQ*DDLEACKKSVPEQVVELSNVERSLFLVVIK<NMVGARRPSWRVISSIS<QK |
Parental | TEGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDK |
TEG..KK.QM..E.R.K.ETELRDICND.L.LLEKFLIP.ASQ.ES..FYLKM.GD...YL.E.A.GDDK | |
Retrocopy | TEGT*KKRQMP*ECRQKTETELRDICNDILPLLEKFLIPSASQIESTGFYLKMIGDCCGYLIELATGDDK |
Parental | KGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVF-YYEILNSPEKACSLAKTA |
KG.VDQ.QQAYQEA.EISKKEMQPT.PIRL.LA.NFSVF..Y..LNSPEKAC.LAKTA | |
Retrocopy | KGTVDQPQQAYQEALEISKKEMQPTCPIRLSLAPNFSVF>WYGTLNSPEKACFLAKTA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |