RetrogeneDB ID: | retro_tsyr_900 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_23346:6123..6544(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 59.21 % |
Parental protein coverage: | 59.59 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 6 |
Parental | VVSSIEQKTEGAEK-KQQMARE-YREKIETELRDIC-NDVLSLLE-KFLIPNASQAESKVFYLKMKGDYY |
VVSSI.....GAE..KQ.MA.E..R...ET.LR.IC.NDVL.LLE.KFLIPNASQA.SK.FYL.MKGDY. | |
Retrocopy | VVSSIGHMIQGAEG<KQ*MAQE<IRKRMETDLRGIC>NDVLTLLE<KFLIPNASQAQSKLFYLRMKGDYC |
Parental | RYLAEVAAGDDKK-GIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTA |
.YLA.VAAGD.K...I.DQS..AYQE.FE...........IR......FSVFY.E.L...EKAC...K.A | |
Retrocopy | -YLAQVAAGDYKE<KILDQSK*AYQETFEVKQRKCS----IRFRMGCKFSVFYCENLDFLEKACTPTKIA |
Parental | -FDEAIAELDTL |
.FDE.IAEL.TL | |
Retrocopy | >FDEVIAELHTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |