RetrogeneDB ID: | retro_tsyr_985 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_26333:12731..13238(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAZ | ||
Ensembl ID: | ENSTSYG00000006150 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:HGNC Symbol;Acc:12855] |
Percent Identity: | 76.47 % |
Parental protein coverage: | 69.39 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQS |
Q..A.E.R.KIET.L..IC..VLS.LEK.LIP.ASQAES.VF.LKM.GD.YRY.AEVAA.DDKKG.V.QS | |
Retrocopy | QHVAQEDRAKIETQLSVICK-VLSHLEKLLIPRASQAESQVFSLKMEGDHYRYSAEVAARDDKKGSVGQS |
Parental | QQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDST |
Q.A..EAF..S..EMQPTHPIRLGLALNF.VFYY.ILNSPE.ACSLAKTAFDEAIA.LDT.SEES.KDS. | |
Retrocopy | QPAHREAFGVSQREMQPTHPIRLGLALNFPVFYYGILNSPEQACSLAKTAFDEAIAGLDT*SEESHKDSA |
Parental | LIMQLLRDNLTLWTSDTQGDEAEAGEGGEN |
L.MQ.LRD.LTLWTSDTQG.EAEAGEGGE. | |
Retrocopy | LSMQFLRDTLTLWTSDTQGAEAEAGEGGED |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |