RetrogeneDB ID: | retro_tsyr_2084 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_88201:1152..1622(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTSYG00000006537 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 69.62 % |
Parental protein coverage: | 63.82 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | IEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEI |
.E.EL..I...VLELL.KYLI.NAT.PESKVFYLKMKG.YF.YL.EVA.GDN......NSQ.AY.EA..I | |
Retrocopy | VESELRFIFIKVLELLVKYLIANATNPESKVFYLKMKGNYFWYLAEVACGDNQKQMIENSQGAY*EASDI |
Parental | SKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAK-TAFDEAIAELDTLNEESYKDSTLIMQLLRDN |
SK.EM..T.PIRLGLALNFSVFY.EILN.PE..C.LAK..AFDEAI.ELDTLNE.SYKDST.IMQL.RDN | |
Retrocopy | SKNEM*TTYPIRLGLALNFSVFYFEILNNPELTCTLAK<KAFDEAIVELDTLNEDSYKDSTIIMQLIRDN |
Parental | LTLWTSENQGDEGDAGEG |
LTLW.....G.E.D..EG | |
Retrocopy | LTLWSPDSAGRECDVAEG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |