RetrogeneDB ID: | retro_tsyr_1854 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_621640:153..723(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDC42 | ||
Ensembl ID: | ENSTSYG00000000679 | ||
Aliases: | None | ||
Description: | cell division cycle 42 [Source:HGNC Symbol;Acc:1736] |
Percent Identity: | 68.95 % |
Parental protein coverage: | 99.48 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPL |
MQ.IKCVVVGDGAVGKTCLLISYTTN.FP.EY.PTVFDNY...VM..G.P..LGL.DTAGQEDYDRLRPL | |
Retrocopy | MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPL |
Parental | SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPE |
SYPQTDVFL.CFS.VSP.SFENV..KW.PE..HHCP.TP..LVGT..DLRDD..TIEKL...K..PIT.. | |
Retrocopy | SYPQTDVFLICFSLVSPASFENVCAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYP |
Parental | TAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPPETQPKRKCCI |
.....A....AVKY.ECSALTQRGLK.VF.EAI.A.L.PP........C. | |
Retrocopy | QGLAMAKEIGAVKYLECSALTQRGLKTVFAEAIRAVLCPPPVKKRKRKCL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |