RetrogeneDB ID: | retro_tsyr_1575 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_495087:525..1092(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDC42 | ||
Ensembl ID: | ENSTSYG00000000679 | ||
Aliases: | None | ||
Description: | cell division cycle 42 [Source:HGNC Symbol;Acc:1736] |
Percent Identity: | 87.83 % |
Parental protein coverage: | 98.95 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLS |
QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVP..FD.YAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLS | |
Retrocopy | QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPNIFDKYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLS |
Parental | YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPET |
.P.TDVFLVCFSVVSPSSFENVKEKW.PEITHHCPKTPFLLVGTQ.DLRDDPST.EKL.KNKQKPITPET | |
Retrocopy | HP*TDVFLVCFSVVSPSSFENVKEKWMPEITHHCPKTPFLLVGTQNDLRDDPSTMEKLVKNKQKPITPET |
Parental | AEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPPETQPKRKCCI |
AE.L.RDLKAVKYVE.S.LTQ.GLKNVFDEA.L.ALEPPE....R.C.. | |
Retrocopy | AEQLTRDLKAVKYVESSPLTQKGLKNVFDEAMLVALEPPEPKKSRRCVL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |