RetrogeneDB ID: | retro_tsyr_2048 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_83751:359..705(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDC42 | ||
Ensembl ID: | ENSTSYG00000000679 | ||
Aliases: | None | ||
Description: | cell division cycle 42 [Source:HGNC Symbol;Acc:1736] |
Percent Identity: | 79.66 % |
Parental protein coverage: | 60.73 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | TDVFLVCFSVVSPSSFENVKEKW-VPEITHHCPKTPFLLVGTQIDLRDDPSTIEKL-AKNKQKPITPETA |
TD......SV.SPSSFENVKEKW.VPEITHHCPKTPFLLV.TQIDLRDDPSTIEKL.AKNKQKP.TPE.A | |
Retrocopy | TDRCISSLSVISPSSFENVKEKW<VPEITHHCPKTPFLLVRTQIDLRDDPSTIEKL<AKNKQKPVTPEIA |
Parental | EKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEPPETQPKRKCCI |
EKLA.DLK.VKYVECSALTQ.GLKNVFDEAIL.ALEP.E....R.C.. | |
Retrocopy | EKLACDLKTVKYVECSALTQKGLKNVFDEAILTALEPLEPKRRRRCVL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |