Parental gene:

ASS1, ENSG00000130707

Aliases:ASS1, ASS, CTLN1
Description:argininosuccinate synthase 1 [Source:HGNC Symbol;Acc:758]
Organism:Human (Homo sapiens)
Coordinates:9:133320315..133376661(+)


>ENSG00000130707
ATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACA
AGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGC
TTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGC
GCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAAACAAGTGGAAATCGCCCA
GCGGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACAGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT
CACTGGCCCCCCAGATAAAGGTCATTGCTCCCTGGAGGATGCCTGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTG
ATGGAGTACGCAAAGCAACACGGGATTCCCATCCCGGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCA
CATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAG
CCAAAGCCCCCAACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGAT
GGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCATGGCGTGGGCCGTATTGA
CATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTC
ATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTG
GTGTATACCGGTTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTGGAAGG
GAAAGTGCAGGTGTCCGTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGGAGC
TGGTGAGCATGAACGTGCAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAAG
GAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG

Library Parental gene expression (RPM)
bodymap2_adipose 238 .28 RPM
bodymap2_adrenal 46 .81 RPM
bodymap2_brain 23 .44 RPM
bodymap2_breast 183 .45 RPM
bodymap2_colon 77 .38 RPM
bodymap2_heart 33 .05 RPM
bodymap2_kidney 245 .71 RPM
bodymap2_liver 432 .27 RPM
bodymap2_lung 79 .76 RPM
bodymap2_lymph_node 41 .15 RPM
bodymap2_ovary 93 .22 RPM
bodymap2_prostate 119 .92 RPM
bodymap2_skeletal_muscle 31 .65 RPM
bodymap2_testis 118 .38 RPM
bodymap2_thyroid 69 .49 RPM
bodymap2_white_blood_cells 0 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020554 possible_ortholog 3 retrogenes
retro_cjac_1219, retro_cjac_4038, retro_cjac_4209,
Gorilla gorilla ENSGGOG00000010228 ortholog_one2one 8 retrogenes
retro_ggor_1346, retro_ggor_1675, retro_ggor_2134, retro_ggor_2403, retro_ggor_2574, retro_ggor_2787, retro_ggor_671, retro_ggor_787,
Myotis lucifugus ENSMLUG00000006066 ortholog_one2one 2 retrogenes
retro_mluc_1058, retro_mluc_1304,
Mus musculus ENSMUSG00000076441 ortholog_one2many 1 retrogene
retro_mmus_135,
Nomascus leucogenys ENSNLEG00000012500 ortholog_one2one 13 retrogenes
retro_nleu_1088, retro_nleu_1245, retro_nleu_1317, retro_nleu_1381, retro_nleu_1390, retro_nleu_1424, retro_nleu_1701, retro_nleu_1792, retro_nleu_220, retro_nleu_253, retro_nleu_2680, retro_nleu_2764, retro_nleu_625,
Pongo abelii ENSPPYG00000019692 ortholog_one2one 13 retrogenes
retro_pabe_1963, retro_pabe_2390, retro_pabe_2637, retro_pabe_2696, retro_pabe_2937, retro_pabe_3069, retro_pabe_3197, retro_pabe_3422, retro_pabe_3460, retro_pabe_3521, retro_pabe_3522, retro_pabe_731, retro_pabe_834,
Pan troglodytes ENSPTRG00000021473 ortholog_one2one 14 retrogenes
retro_ptro_1590, retro_ptro_1951, retro_ptro_2101, retro_ptro_2199, retro_ptro_2268, retro_ptro_2421, retro_ptro_2602, retro_ptro_2821, retro_ptro_2836, retro_ptro_3064, retro_ptro_3158, retro_ptro_3298, retro_ptro_571, retro_ptro_762,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_820 86.32 79.61
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2. retro_hsap_985 87.68 100.00
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3. retro_hsap_2247 77.92 74.51
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4. retro_hsap_2885 84.15 88.11
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5. retro_hsap_3109 83.03 52.67
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6. retro_hsap_3175 86.92 77.67
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7. retro_hsap_3252 83.09 65.53
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8. retro_hsap_3564 87.05 100.00
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9. retro_hsap_3824 88.58 69.66
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10. retro_hsap_4149 87.68 100.00
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11. retro_hsap_4182 83.73 60.19
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12. retro_hsap_4648 82.65 100.00
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13. retro_hsap_4743 85.51 100.00
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14. retro_hsap_4934 75.18 100.00
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Download FASTA sequences of all ENSG00000130707 retrocopies