Parental gene: | ASS1, ENSG00000130707 |
| Aliases: | ASS1, ASS, CTLN1 |
| Description: | argininosuccinate synthase 1 [Source:HGNC Symbol;Acc:758] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 9:133320315..133376661(+) |
>ENSG00000130707
ATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACA
AGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGC
TTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGC
GCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAAACAAGTGGAAATCGCCCA
GCGGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACAGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT
CACTGGCCCCCCAGATAAAGGTCATTGCTCCCTGGAGGATGCCTGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTG
ATGGAGTACGCAAAGCAACACGGGATTCCCATCCCGGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCA
CATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAG
CCAAAGCCCCCAACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGAT
GGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCATGGCGTGGGCCGTATTGA
CATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTC
ATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTG
GTGTATACCGGTTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTGGAAGG
GAAAGTGCAGGTGTCCGTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGGAGC
TGGTGAGCATGAACGTGCAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAAG
GAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG
ATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACA
AGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGC
TTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGC
GCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAAACAAGTGGAAATCGCCCA
GCGGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACAGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT
CACTGGCCCCCCAGATAAAGGTCATTGCTCCCTGGAGGATGCCTGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTG
ATGGAGTACGCAAAGCAACACGGGATTCCCATCCCGGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCA
CATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAG
CCAAAGCCCCCAACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGAT
GGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCATGGCGTGGGCCGTATTGA
CATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTC
ATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTG
GTGTATACCGGTTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTGGAAGG
GAAAGTGCAGGTGTCCGTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGGAGC
TGGTGAGCATGAACGTGCAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAAG
GAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 432 .27 RPM |
| bodymap2_lung | 79 .76 RPM |
| bodymap2_breast | 183 .45 RPM |
| bodymap2_adipose | 238 .28 RPM |
| bodymap2_adrenal | 46 .81 RPM |
| bodymap2_skeletal_muscle | 31 .65 RPM |
| bodymap2_thyroid | 69 .49 RPM |
| bodymap2_prostate | 119 .92 RPM |
| bodymap2_colon | 77 .38 RPM |
| bodymap2_testis | 118 .38 RPM |
| bodymap2_brain | 23 .44 RPM |
| bodymap2_heart | 33 .05 RPM |
| bodymap2_white_blood_cells | 0 .18 RPM |
| bodymap2_lymph_node | 41 .15 RPM |
| bodymap2_ovary | 93 .22 RPM |
| bodymap2_kidney | 245 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020554 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010228 | ortholog_one2one | 8 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006066 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000076441 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012500 | ortholog_one2one | 13 retrogenes | |
| Pongo abelii | ENSPPYG00000019692 | ortholog_one2one | 13 retrogenes | |
| Pan troglodytes | ENSPTRG00000021473 | ortholog_one2one | 14 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_820 | 86.32 | 79.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_985 | 87.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_2247 | 77.92 | 74.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2885 | 84.15 | 88.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3109 | 83.03 | 52.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3175 | 86.92 | 77.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_3252 | 83.09 | 65.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_3564 | 87.05 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_3824 | 88.58 | 69.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_4149 | 87.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_hsap_4182 | 83.73 | 60.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_hsap_4648 | 82.65 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_hsap_4743 | 85.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_hsap_4934 | 75.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000130707 retrocopies