RetrogeneDB ID: | retro_nleu_1245 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397286.1:11635095..11636036(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ASS1 | ||
Ensembl ID: | ENSNLEG00000012500 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.17 % |
Parental protein coverage: | 71.49 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | DSRRWELTPPIPDAMSSKGSVVLAYSGGL-DTSCILVWLKEQGYDVIAYLANIGQKEDFEEARKKALKLG |
DSR.WEL.PPIPDAMSSK.SVVL.YSGGL.DTSCILV.LKEQG.D.IAY.AN.GQKEDFEEARKKALKLG | |
Retrocopy | DSRCWELVPPIPDAMSSKDSVVLVYSGGL<DTSCILVLLKEQG*DIIAYVANSGQKEDFEEARKKALKLG |
Parental | AKKVFIEDVSREFVEEFIWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQ |
.K..FIE.VS.EFV.EFIW.AIQSS.LYEDRYLLGTSL.RPCI..KQVEIAQ..GAK.VSH.ATGKGNDQ | |
Retrocopy | GKMMFIEEVSKEFVKEFIWLAIQSSTLYEDRYLLGTSLTRPCISQKQVEIAQQPGAK*VSHSATGKGNDQ |
Parental | VRFELSCYSLAPQIKVIAPWRMPEFYNRFKGRNDLMEYAKQHGIPIPVTPKNPWSMDENLMHISYEAGIL |
VRFEL.CYSLA.QIKVIAP.RMP.FYNRF..RNDLMEYAKQHGIPIPVTPKNP.SMDENLM.ISYEAGIL | |
Retrocopy | VRFELICYSLASQIKVIAP*RMPKFYNRFEVRNDLMEYAKQHGIPIPVTPKNP*SMDENLMQISYEAGIL |
Parental | ENPKNQAPPGLYTKTQDPAKAPNTPDILEIEFKKGVPVKVTNVKDGTTHQTSLELFMYLNEVAGKHGVGR |
ENP.NQAPPGL..KTQD.AKAP.TPDILEIEFK.GVPVKVTNVKDGTTHQTSLELF.Y..E.AGKHG.GR | |
Retrocopy | ENPNNQAPPGLSRKTQDLAKAPRTPDILEIEFK*GVPVKVTNVKDGTTHQTSLELFLYMREDAGKHGLGR |
Parental | IDIVENRFI---GMKSRGIYETPAGTILYHAHLDI |
IDI.EN.F....GMKS..IYETPAGTI.YHAHLDI | |
Retrocopy | IDIKENHFTRMNGMKSPVIYETPAGTIIYHAHLDI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000020554 | 3 retrocopies | |
Homo sapiens | ENSG00000130707 | 14 retrocopies | |
Gorilla gorilla | ENSGGOG00000010228 | 8 retrocopies | |
Myotis lucifugus | ENSMLUG00000006066 | 2 retrocopies | |
Mus musculus | ENSMUSG00000076441 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000012500 | 13 retrocopies | |
Pongo abelii | ENSPPYG00000019692 | 13 retrocopies | |
Pan troglodytes | ENSPTRG00000021473 | 14 retrocopies |