Parental gene:

ASS1, ENSNLEG00000012500

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397403.1:107021..155638(+)


>ENSNLEG00000012500
AGAGTAGTTCACTGCACTGTGAAGACAGATTCCAGACGCTGGGAACTCACGCCTCCAATCCCAGACGCTATGTCCAGCAA
AGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACAAGGCTATGACG
TCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGCTTGGGGCTAAA
AAGGTATTCATTGAGGATGTCAGCAGGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGCGCACTGTATGA
GGACCGCTACCTCCTGGGCACCTCTCTCGCCAGGCCTTGCATCGCCCGCAAACAAGTGGAAATCGCCCAGCGGGAGGGGG
CCAAGTATGTGTCCCACGGCGCCACGGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACTCGCTGGCCCCC
CAGATAAAGGTCATTGCTCCTTGGAGGATGCCCGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTGATGGAATACGC
AAAGCAACACGGGATTCCCATCCCGGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCATATCAGCTACG
AGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAGCCAAAGCCCCC
AACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGATGGTACCACCCA
CCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCACGGCGTGGGCCGTATTGACATCGTGGAGA
ACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCACGCTCATTTAGACATC
GAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTGGTGTATACTGG
TTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATTGCCAAGTCCCAGGAGCGAGTGGAAGGGAAAGTGCAGG
TGTCCGTCCTCAAGGGTCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAACGAGGAGCTGGTGAGCATG
AACGTGCAGGGTGATTATGAACCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAAGGAATATCATCG
TCTCCAGAGCAAGGTCACTGCCAAATAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020554 possible_ortholog 3 retrogenes
retro_cjac_1219, retro_cjac_4038, retro_cjac_4209,
Homo sapiens ENSG00000130707 ortholog_one2one 14 retrogenes
retro_hsap_2247, retro_hsap_2885, retro_hsap_3109, retro_hsap_3175, retro_hsap_3252, retro_hsap_3564, retro_hsap_3824, retro_hsap_4149, retro_hsap_4182, retro_hsap_4648, retro_hsap_4743, retro_hsap_4934, retro_hsap_820, retro_hsap_985,
Gorilla gorilla ENSGGOG00000010228 ortholog_one2one 8 retrogenes
retro_ggor_1346, retro_ggor_1675, retro_ggor_2134, retro_ggor_2403, retro_ggor_2574, retro_ggor_2787, retro_ggor_671, retro_ggor_787,
Myotis lucifugus ENSMLUG00000006066 ortholog_one2one 2 retrogenes
retro_mluc_1058, retro_mluc_1304,
Mus musculus ENSMUSG00000076441 ortholog_one2many 1 retrogene
retro_mmus_135,
Pongo abelii ENSPPYG00000019692 ortholog_one2one 13 retrogenes
retro_pabe_1963, retro_pabe_2390, retro_pabe_2637, retro_pabe_2696, retro_pabe_2937, retro_pabe_3069, retro_pabe_3197, retro_pabe_3422, retro_pabe_3460, retro_pabe_3521, retro_pabe_3522, retro_pabe_731, retro_pabe_834,
Pan troglodytes ENSPTRG00000021473 ortholog_one2one 14 retrogenes
retro_ptro_1590, retro_ptro_1951, retro_ptro_2101, retro_ptro_2199, retro_ptro_2268, retro_ptro_2421, retro_ptro_2602, retro_ptro_2821, retro_ptro_2836, retro_ptro_3064, retro_ptro_3158, retro_ptro_3298, retro_ptro_571, retro_ptro_762,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_220 82.20 76.78
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2. retro_nleu_253 84.68 76.32
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3. retro_nleu_625 81.05 100.00
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4. retro_nleu_1088 80.63 50.80
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5. retro_nleu_1245 83.17 71.49
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6. retro_nleu_1317 79.60 57.01
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7. retro_nleu_1381 85.19 100.00
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8. retro_nleu_1390 85.29 76.09
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9. retro_nleu_1424 96.16 95.86
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10. retro_nleu_1701 84.07 61.84
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11. retro_nleu_1792 80.83 54.02
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12. retro_nleu_2680 86.76 85.06
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13. retro_nleu_2764 83.64 100.00
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Download FASTA sequences of all ENSNLEG00000012500 retrocopies