RetrogeneDB ID: | retro_nleu_1390 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397291.1:24712081..24713068(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ASS1 | ||
Ensembl ID: | ENSNLEG00000012500 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 85.29 % |
Parental protein coverage: | 76.09 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | LYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLAPQIKVIAPWRMPEFY |
LYE.RYLLGTSLARP.IA.KQ.EIAQRE.AKYV.HG..GKGNDQV.FEL.CY.LAPQIKVIAPWRMPEFY | |
Retrocopy | LYENRYLLGTSLARPGIASKQAEIAQREKAKYVFHGTAGKGNDQVWFELTCYLLAPQIKVIAPWRMPEFY |
Parental | NRFKGRNDLMEYAKQHGIPIPVTPKNPWSMDENLMHISYEAGILENPK-NQAPPGLYTKTQDPAKAPNTP |
NRFKG.NDLM..AKQH..PIPVTP..P.SMDENLMHISYEAGILE.P..NQ.PPGLYTKTQDPAKA.NTP | |
Retrocopy | NRFKGLNDLMK*AKQHRVPIPVTPQSP*SMDENLMHISYEAGILE-PQ>NQVPPGLYTKTQDPAKALNTP |
Parental | DILEIEFKKGVPVKVTNVKDGTTHQTSLELFMYLNEVAGKHGVGRIDIVENRFIGMKSRGIYETPAGTIL |
DILEIEFKKG.PVKVTNVKDGTTHQTSLELF.YLNEVAGKH.VG.IDIVENRFIGMKS..I.E.PAGTI. | |
Retrocopy | DILEIEFKKGAPVKVTNVKDGTTHQTSLELFVYLNEVAGKHSVGSIDIVENRFIGMKS*DICEAPAGTIF |
Parental | YHAHLDIEAFTMDREVRKIKQGLGLKFAELVYTGFWHSPECEFVRHCIAKSQERVEGKVQVSVLKGQVYI |
YH.HLDI.AFT..REV.KIKQGLGLKFAELVYT.FWHSPECEFVRHC..KSQ..VEGKVQVSVLKGQVYI | |
Retrocopy | YHTHLDIKAFTIYREVCKIKQGLGLKFAELVYTSFWHSPECEFVRHCNTKSQQ*VEGKVQVSVLKGQVYI |
Parental | LGRESPLSLYNEELVSMNVQGDYEPTDATG-FININSLRLKEYHRLQSKVTAK |
LGR.SPLSLYNEELVSMNVQGDYEP.DATG.FININSLRLKE.H.LQ.KVTAK | |
Retrocopy | LGRGSPLSLYNEELVSMNVQGDYEPIDATG<FININSLRLKECH-LQNKVTAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000020554 | 3 retrocopies | |
Homo sapiens | ENSG00000130707 | 14 retrocopies | |
Gorilla gorilla | ENSGGOG00000010228 | 8 retrocopies | |
Myotis lucifugus | ENSMLUG00000006066 | 2 retrocopies | |
Mus musculus | ENSMUSG00000076441 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000012500 | 13 retrocopies | |
Pongo abelii | ENSPPYG00000019692 | 13 retrocopies | |
Pan troglodytes | ENSPTRG00000021473 | 14 retrocopies |