RetrogeneDB ID: | retro_mluc_1304 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429817:2203857..2204375(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ASS1 | ||
Ensembl ID: | ENSMLUG00000006066 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.48 % |
Parental protein coverage: | 63.41 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | IEFKKGVPVKVTNVKDGTTHRSSLELFVYLNEIAGKHGVGRIDI-VENRFIGMKSRGIYETPAGTVLYHA |
IEFKKGV..KVTN.KDGTTH..SLELF.YLNE.AGKHG.G..DI..EN.FI.MKSR.IY..P...VLYH. | |
Retrocopy | IEFKKGVLEKVTNIKDGTTHGMSLELFIYLNEVAGKHGLGSSDI<QENHFIRMKSRCIYKIPSEVVLYHT |
Parental | HLDIEAFTMDREVRKIKQGLGLKFAELVYTGFWHSPECEFVRHCIAKSQERVEGKVQVSVFKGQVYILGR |
HL..E.FT.D.EV.KIK..LGLKF.....T.FWHS.E.EF..H.I.K.Q..VE.KV.VS.FKGQ.YILGR | |
Retrocopy | HLNTETFTLD*EVCKIKHSLGLKFTQ--HTRFWHSSEYEFICH*ITK*QDYVERKVLVSPFKGQMYILGR |
Parental | ESPLSLYNEELVSMNVQGDYEPIDATGFININSLRL |
E..LSLY.E..VSMN.Q..Y.P.DA.GFININSLRL | |
Retrocopy | EFLLSLYKEQPVSMNIQDNY*PVDALGFININSLRL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000020554 | 3 retrocopies | |
Homo sapiens | ENSG00000130707 | 14 retrocopies | |
Gorilla gorilla | ENSGGOG00000010228 | 8 retrocopies | |
Myotis lucifugus | ENSMLUG00000006066 | 2 retrocopies |
retro_mluc_1058, retro_mluc_1304 ,
|
Mus musculus | ENSMUSG00000076441 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000012500 | 13 retrocopies | |
Pongo abelii | ENSPPYG00000019692 | 13 retrocopies | |
Pan troglodytes | ENSPTRG00000021473 | 14 retrocopies |