Parental gene: | ASS1, ENSPTRG00000021473 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:129768496..129824968(+) |
>ENSPTRG00000021473
ATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACA
AGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGC
TTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAAGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGC
GCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAAACAAGTGGAAATCGCCCA
GCGGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACAGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT
CGCTGGCCCCCCACATAAAGGTCATTGCTCCCTGGAGGATGCCCGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTA
ATGGAGTACGCAAAGCAACACGGGATTCCCATCCCAGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCA
CATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAG
CCAAAGCCCCCAACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGAT
GGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCATGGCGTGGGCCGTATTGA
CATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTC
ATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTG
GTGTATACCGGTTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTGGAAGG
GAAAGTGCAGGTGTCCGTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGGAGC
TGGTGAGCATGAACGTGCAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAAG
GAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG
ATGTCCAGCAAAGGCTCCGTGGTTCTGGCCTACAGTGGCGGCCTGGACACCTCGTGCATCCTCGTGTGGCTGAAGGAACA
AGGCTATGACGTCATTGCCTATCTGGCCAACATTGGCCAGAAGGAAGACTTCGAGGAAGCCAGGAAGAAGGCACTGAAGC
TTGGGGCCAAAAAGGTGTTCATTGAGGATGTCAGCAAGGAGTTTGTGGAGGAGTTCATCTGGCCGGCCATCCAGTCCAGC
GCACTGTATGAGGACCGCTACCTCCTGGGCACCTCTCTTGCCAGGCCCTGCATCGCCCGCAAACAAGTGGAAATCGCCCA
GCGGGAGGGGGCCAAGTATGTGTCCCACGGCGCCACAGGAAAGGGGAACGATCAGGTCCGGTTTGAGCTCAGCTGCTACT
CGCTGGCCCCCCACATAAAGGTCATTGCTCCCTGGAGGATGCCCGAATTCTACAACCGGTTCAAGGGCCGCAATGACCTA
ATGGAGTACGCAAAGCAACACGGGATTCCCATCCCAGTCACTCCCAAGAACCCGTGGAGCATGGATGAGAACCTCATGCA
CATCAGCTACGAGGCTGGAATCCTGGAGAACCCCAAGAACCAAGCGCCTCCAGGTCTCTACACGAAGACCCAGGACCCAG
CCAAAGCCCCCAACACCCCTGACATTCTCGAGATCGAGTTCAAAAAAGGGGTCCCTGTGAAGGTGACCAACGTCAAGGAT
GGCACCACCCACCAGACCTCCTTGGAGCTCTTCATGTACCTGAACGAAGTCGCGGGCAAGCATGGCGTGGGCCGTATTGA
CATCGTGGAGAACCGCTTCATTGGAATGAAGTCCCGAGGTATCTACGAGACCCCAGCAGGCACCATCCTTTACCATGCTC
ATTTAGACATCGAGGCCTTCACCATGGACCGGGAAGTGCGCAAAATCAAACAAGGCCTGGGCTTGAAATTTGCTGAGCTG
GTGTATACCGGTTTCTGGCACAGCCCTGAGTGTGAATTTGTCCGCCACTGCATCGCCAAGTCCCAGGAGCGAGTGGAAGG
GAAAGTGCAGGTGTCCGTCCTCAAGGGCCAGGTGTACATCCTCGGCCGGGAGTCCCCACTGTCTCTCTACAATGAGGAGC
TGGTGAGCATGAACGTGCAGGGTGATTATGAGCCAACTGATGCCACCGGGTTCATCAACATCAATTCCCTCAGGCTGAAG
GAATATCATCGTCTCCAGAGCAAGGTCACTGCCAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 42 .11 RPM |
| SRP007412_cerebellum | 48 .83 RPM |
| SRP007412_heart | 16 .26 RPM |
| SRP007412_kidney | 1168 .07 RPM |
| SRP007412_liver | 933 .12 RPM |
| SRP007412_testis | 18 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020554 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000130707 | ortholog_one2one | 14 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010228 | ortholog_one2one | 8 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006066 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000076441 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012500 | ortholog_one2one | 13 retrogenes | |
| Pongo abelii | ENSPPYG00000019692 | ortholog_one2one | 13 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_571 | 85.11 | 79.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_762 | 86.47 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1590 | 77.60 | 74.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1951 | 83.61 | 88.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2101 | 82.11 | 52.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_2199 | 82.72 | 65.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_2268 | 86.29 | 77.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_2421 | 87.39 | 84.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ptro_2602 | 86.55 | 69.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ptro_2821 | 87.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ptro_2836 | 80.16 | 60.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_ptro_3064 | 83.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_ptro_3158 | 85.96 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_ptro_3298 | 74.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000021473 retrocopies