RetrogeneDB ID: | retro_etel_1120 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_215030:4142..4519(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000010018 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.42 % |
Parental protein coverage: | 52.42 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | NGAFVKLNKASINMLRIVEPYIA-WGYPNLKS-VNELIYKRGYGKINKKRIALTDNTLIARSLGKYGIIC |
.GAFVK.NK.S.NMLR.VEP..A..G.PN.KS...ELI.KRGYG.I.K..I.L...TL...SLG.YG..C | |
Retrocopy | SGAFVKRNKGSMNMLRMVEPRVA<TGNPNVKS<MSELISKRGYGDI-KQSIVL---TLNV*SLGQYGTSC |
Parental | MEDLIHEIYTVGK-RFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
.EDLI.EI.TVGK.RFKEAN.FLWPF..S.PRGG.KKKTTH.VEGGDAG.R.DQINRLIRR.N | |
Retrocopy | VEDLILEIWTVGK>RFKEANDFLWPFTFSLPRGGLKKKTTHSVEGGDAGHRQDQINRLIRRTN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |