RetrogeneDB ID: | retro_etel_175 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3018:127828..128583(+) | ||
Located in intron of: | ENSETEG00000018290 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.12 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MEAVAEKKKAAPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIR |
ME.V.E..K.APAV..TL.KKRR.F.ELKIK.LRKKFAQKML..ARR.LIY.KAKH.HKE..QM.RTEIR | |
Retrocopy | MEGVLEEEKKAPAVA*TLTKKRRAFTELKIKCLRKKFAQKMLLQARRTLIYGKAKHHHKEGGQMGRTEIR |
Parental | MARMARKAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYI |
MARMA.KAGNFYV..EP.LA.V.R.RG..GV.PKVRKVLQLLRLRQI..G..VKLNK.S.NML.IVEPY. | |
Retrocopy | MARMAGKAGNFYVTREPSLASVLRVRGVSGVIPKVRKVLQLLRLRQIVTGTRVKLNKTSMNMLGIVEPYV |
Parental | AWGY----PNLKSVNELIYKRGYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANN |
A..Y....P.LKS.NEL..KRG.GKI.KKR.ALTDN...ARSLG.Y..ICMED.IHE..TVGKRFKEANN | |
Retrocopy | AHTYTQPYPTLKSANELMHKRGDGKISKKRMALTDNAPTARSLGQYDPICMEDRIHESCTVGKRFKEANN |
Parental | FLWPFKLSSPRGGMKKKTTHFVEGGDA-GNREDQINRLIRRMN |
FLWPFK.SSPRGGMKKK.THFV.G.DA.G.REDQ..R.IRRMN | |
Retrocopy | FLWPFK*SSPRGGMKKKVTHFVDGRDA<GHREDQSDRFIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |