RetrogeneDB ID: | retro_etel_375 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6518:11532..11915(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.42 % |
Parental protein coverage: | 52.82 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | AVPETLKKKRRNFAELKIKRLR-KKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNF |
AVPE.L.KK.R.FAELKIK.L...KFAQ.....ARRK.I.EKAKHY.KEYR.MYRTEI.....ARKAGNF | |
Retrocopy | AVPEILMKK*RDFAELKIKCLE<RKFAQQVFQKARRKPICEKAKHYPKEYR*MYRTEIQG---ARKAGNF |
Parental | YVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYIAWG |
.VPGEP.LAFVI..RG.NG.SP.....LQL....QIF.G..VKLNK.S.NM.RIVEPYIAWG | |
Retrocopy | SVPGEPRLAFVIGVRGLNGMSPRI*RRLQLRHFLQIFSGTRVKLNKVSMNMPRIVEPYIAWG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |