RetrogeneDB ID: | retro_etel_554 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_9014:126738..127196(+) | ||
Located in intron of: | ENSETEG00000010745 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.23 % |
Parental protein coverage: | 62.1 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPGEP |
..KKRRNF.E.K.K.LRK.FAQKML..ARRKLIYEKAKH..KEYRQMYRTEIRMA.MARKAGNFYVP.EP | |
Retrocopy | IMKKRRNFTEPKMKHLRK-FAQKMLQKARRKLIYEKAKHHYKEYRQMYRTEIRMAQMARKAGNFYVPKEP |
Parental | KLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYIAWGY-PNLKSVNELIYK |
KLAFVIRIRGINGVSPKV.KVLQL..LRQIF.G.FVKLNKA..NMLRIVEPYIAWGY.P.LKS.NELIYK | |
Retrocopy | KLAFVIRIRGINGVSPKVQKVLQLFHLRQIFRGTFVKLNKALMNMLRIVEPYIAWGY<PKLKSANELIYK |
Parental | RGYGKINKKRIALTD |
RG..KINKK.IALTD | |
Retrocopy | RGCAKINKKCIALTD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |