RetrogeneDB ID: | retro_etel_610 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_102586:4962..5444(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.72 % |
Parental protein coverage: | 65.73 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 6 |
Parental | EAVAEKKKAAPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYR-QMYRTEIR |
E.VAEKKK..P..P.T.K.KRRN.AEL.IK.LRK.FAQKML..A.R.L.YEKA.H.HKE.R....RT.IR | |
Retrocopy | ESVAEKKKKVPTLPQTVKEKRRNCAELAIKHLRKEFAQKMLQKA-RTLVYEKAQH*HKEHR>RVDRTGIR |
Parental | MARMARKAGNFYVPG-EPKLAFVIRIRGINGVSPKVR-KVLQLLRLRQIFNGAFVKLNKASINMLRI-VE |
M.R.ARKA.N...PG.EPKLA...RI.G.NGVSPKV..KVLQLLRLR.I..G..V.L..AS.N.L....E | |
Retrocopy | MSRRARKADN**APG<EPKLASITRIGGLNGVSPKVK<KVLQLLRLRRIVTGTCVELKQASVNRLGM<GE |
Parental | PYIAW-GYP-NLKSVNELIYKRGYGKINK |
P.IAW.GYP.NL.S.NEL.Y.RG.GK..K | |
Retrocopy | PDIAW<GYP<NLQSGNELLYQRGDGKLGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |