RetrogeneDB ID: | retro_etel_865 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_177821:1489..2099(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.39 % |
Parental protein coverage: | 81.45 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VAEKKKAAPAVPETLKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIRMAR |
V....K..........K..R.FAELKIK..RKKFAQKML..ARRKLIYE..KH.HKE.RQMY.TEIRMAR | |
Retrocopy | VSQGRKRRSLLFQRPLKE*RSFAELKIKCPRKKFAQKMLQKARRKLIYEEGKHDHKESRQMYGTEIRMAR |
Parental | MARKAGNFY--VPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYI- |
MAR.A.NFY...P.EPKLAF..RI..INGVSPKVRKVLQLLRLRQ.F.G.F.KLNKAS.NML..VEPY.. | |
Retrocopy | MARQAANFYEKLPAEPKLAFLFRI*AINGVSPKVRKVLQLLRLRQVFSGIFIKLNKASMNMLKMVEPYM< |
Parental | AWGYPNLKSVNELIYKRGYGKINKKRIALTDNTLIARSLGK-YGIICMEDLIHEIYTVGKRFKEAN |
AWGYP.LKSVNEL.Y.R..GKINKK.IA.TDNTL.A.SLG..YGIICME.L..EI.TVGK.FKEAN | |
Retrocopy | AWGYPHLKSVNELVYRRDSGKINKKCIAPTDNTLVAHSLGN<YGIICMEALTQEICTVGKHFKEAN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |