Parental gene:

ENSNLEG00000026615

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397324.1:1272819..1276948(-)


>ENSNLEG00000026615
ATGATTGGTTTTCAGCTTCGAAAGGCAAGGAGGAAGCTTATCTATGAAAAAGCAAAGCACTATCACAAGGAATATAGGCA
AATGTACAGAACTGAAATTCGAATGGCGAGGATGGCAAGAAAAGCTGGCAACTTCTATGTACCTGCAGAACCCAAATTGG
CGTTTGTCATCAGAATCAGAGGTATCAACGGCGTGAGCCCAAAGGTTCGAAAGGTGTTGCAGCTGCTTCGCCTTCGTCAA
ATCTTCAATGGAACCTTTGTGAAGCTCAACAAGGCTTCGATTAACATGCTGAGGATTGTAGAGCCATATATTGCATGGGG
GTACCCCAATCTCAAGTCAGTAAATGAACTAATCTACAAGCGTGGTTATGGCAAAATCAATAAGAAGCGAATTGCTTTGA
CAGATAACGCTTTGATTGCTCGATCTCTTGGTAAATACGGCATCATCTGCATGGAGGATCTGATTCATGAGATATATACT
GTTGGAAAACGCTTCAAAGAGGCAAATAACTTCCTGTGGCCCTTCAAATTGTCTTCTCCACGAGGTGGAATGAAGAAAAA
GACAACCCATTTTGTAGAAGGTGGAGATGCTGGCAACAGGGAGGACCAGATCAACAGGCTTATTAGAAGAATGAACTAA

Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000004140 ortholog_one2one 18 retrogenes
retro_cpor_1056, retro_cpor_1190, retro_cpor_1342, retro_cpor_1347, retro_cpor_1348, retro_cpor_1366, retro_cpor_1418, retro_cpor_1449, retro_cpor_1452, retro_cpor_1453, retro_cpor_187, retro_cpor_209, retro_cpor_245, retro_cpor_266, retro_cpor_397, retro_cpor_458, retro_cpor_506, retro_cpor_640,
Erinaceus europaeus ENSEEUG00000010307 ortholog_one2many 3 retrogenes
retro_eeur_354, retro_eeur_420, retro_eeur_55,
Echinops telfairi ENSETEG00000005656 ortholog_one2one 33 retrogenes
retro_etel_1099, retro_etel_1120, retro_etel_1154, retro_etel_1158, retro_etel_1333, retro_etel_1370, retro_etel_1553, retro_etel_1642, retro_etel_1708, retro_etel_1720, retro_etel_175, retro_etel_185, retro_etel_1891, retro_etel_2042, retro_etel_2044, retro_etel_2118, retro_etel_2149, retro_etel_265, retro_etel_316, retro_etel_375, retro_etel_402, retro_etel_519, retro_etel_532, retro_etel_554, retro_etel_610, retro_etel_793, retro_etel_865, retro_etel_869, retro_etel_877, retro_etel_887, retro_etel_889, retro_etel_992, retro_etel_993,
Latimeria chalumnae ENSLACG00000003571 ortholog_one2many 1 retrogene
retro_lcha_63,
Macropus eugenii ENSMEUG00000016319 ortholog_many2many 9 retrogenes
retro_meug_1002, retro_meug_1449, retro_meug_1942, retro_meug_1947, retro_meug_60, retro_meug_760, retro_meug_84, retro_meug_968, retro_meug_99,
Monodelphis domestica ENSMODG00000007136 ortholog_many2many 4 retrogenes
retro_mdom_1341, retro_mdom_1998, retro_mdom_371, retro_mdom_66,
Mustela putorius furo ENSMPUG00000010240 ortholog_one2one 15 retrogenes
retro_mputfur_1004, retro_mputfur_1031, retro_mputfur_1034, retro_mputfur_1035, retro_mputfur_1156, retro_mputfur_1168, retro_mputfur_1384, retro_mputfur_1454, retro_mputfur_1481, retro_mputfur_390, retro_mputfur_410, retro_mputfur_545, retro_mputfur_839, retro_mputfur_929, retro_mputfur_982,
Nomascus leucogenys ENSNLEG00000004649 within_species_paralog 21 retrogenes
retro_nleu_1375, retro_nleu_1597, retro_nleu_1646, retro_nleu_1661, retro_nleu_2007, retro_nleu_2011, retro_nleu_2017, retro_nleu_2138, retro_nleu_2201, retro_nleu_2282, retro_nleu_2562, retro_nleu_2599, retro_nleu_2694, retro_nleu_2863, retro_nleu_2938, retro_nleu_332, retro_nleu_502, retro_nleu_536, retro_nleu_597, retro_nleu_711, retro_nleu_727,
Sorex araneus ENSSARG00000001088 ortholog_one2one 3 retrogenes
retro_sara_268, retro_sara_310, retro_sara_623,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_3 97.58 97.64
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2. retro_nleu_901 67.72 59.43
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3. retro_nleu_1012 86.18 57.55
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4. retro_nleu_1459 81.68 61.79
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5. retro_nleu_1696 85.37 95.28
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6. retro_nleu_1853 88.42 89.62
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7. retro_nleu_2479 76.34 61.79
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8. retro_nleu_2603 89.64 90.57
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Download FASTA sequences of all ENSNLEG00000026615 retrocopies