RetrogeneDB ID: | retro_etel_992 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_19835:194..899(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 72.8 % |
Parental protein coverage: | 95.16 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 3 |
Parental | MEAVAEKK-KAAPAVPETLKKKRR-NFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTE |
ME.VAE.K.K...A.PET.KKKRR.NFAELKIK.LRKK.AQKM...A.RKL.YEK.KH.HKEYRQ.YRT. | |
Retrocopy | MEGVAERK<KKVLAAPETHKKKRR<NFAELKIKHLRKKLAQKMFQKAQRKLNYEKVKHSHKEYRQVYRTK |
Parental | IRMARMARKAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEP |
..MA.MARKA.NF...GEPKLAF.I.IRG.NGVSP.....LQLLRL.QIFNG.FVKLNKA.INMLR..EP | |
Retrocopy | N*MAWMARKACNFHIHGEPKLAFMIKIRGVNGVSPWSKRMLQLLRLQQIFNGIFVKLNKA*INMLRTMEP |
Parental | YIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFL |
Y.AWGYP.L.SV.EL.YK.GYGKI.KK.IALT.N.L.A.S.GKYGI..MEDLIHEIYTVGK.FKEA.NF. | |
Retrocopy | YSAWGYPILTSVKELLYKPGYGKIIKKQIALTHNALTA*SPGKYGISSMEDLIHEIYTVGKCFKEASNFS |
Parental | WP-FKLSSPRGGMKKKTTHFVEGGDAGNR |
WP.FKLSSP.G.MKKKTTHF.EGG...NR | |
Retrocopy | WP<FKLSSP*GEMKKKTTHFIEGGHVDNR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |