RetrogeneDB ID: | retro_sara_268 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_138525:1539..1988(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSARG00000001088 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.18 % |
Parental protein coverage: | 60.89 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | INGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLK-SVNELIYKRGYGKIHKKR |
INGV.P...K.L....L.QIFNGTFVK.NKASINM.RIVEPY.AWGYPN.K.SVN.LIY..GY.K..KK. | |
Retrocopy | INGVNP---KALLHVCLQQIFNGTFVKVNKASINMPRIVEPYVAWGYPNSKMSVNKLIYRYGYDKL*KK* |
Parental | IALTDNALIARTL-GKYGIVCMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKT---THFVEGGD |
I..T...LI...L.GKY..VC..DLI.EI.TVGK.F.EANNFLWPFKLS.PR...KK.T........G.D | |
Retrocopy | I--TQ*LLILKLL<GKYSVVCTKDLIPEIDTVGKCFIEANNFLWPFKLSLPRVARKKSTPLPPAYCRGED |
Parental | AGNREDQINRLIRRMN |
AG..EDQ.N.LI.RM. | |
Retrocopy | AGKSEDQTNQLIIRMS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |