RetrogeneDB ID: | retro_etel_889 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_180307:6166..6682(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000018926 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 73.45 % |
Parental protein coverage: | 71.37 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | ARMARKAGNFYVPGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPYIA |
ARMA..AG.F.VPGEP.LA.V.R...INGV.PKV..VLQ.LRLRQIFNG.F...NKAS.NML...EP..A | |
Retrocopy | ARMAGRAGSFSVPGEPNLACVLR---INGVGPKVPNVLQVLRLRQIFNGTFE--NKASMNMLSPAEPGTA |
Parental | WGYPNLKSVNELIYKRGYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPF |
.GYPN.KSVNELIYKRG..KIN..R.ALTDN.LIARSLGK.G.IC.EDL.HEIYTVGK.FKE.NNFLW.F | |
Retrocopy | *GYPNPKSVNELIYKRGDDKINTERVALTDNALIARSLGKFGDICREDLVHEIYTVGKAFKE*NNFLWLF |
Parental | KLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN |
K.SSP.GGMKKKTTHF..G.DAGNREDQ.NRLI.R.N | |
Retrocopy | K*SSPGGGMKKKTTHFIDGADAGNREDQVNRLIERRN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |