RetrogeneDB ID: | retro_etel_316 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5217:77931..78471(+) | ||
Located in intron of: | ENSETEG00000010447 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 88.52 % |
Parental protein coverage: | 72.98 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | EAVAEKKKAA-PAVPETLKKKRRNFAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKEYRQMYRTEIR |
EAVAEKKK.A.PAVPETLKKKRRNF.ELKIK.LRKKFAQK.L..ARRKLIYEKAKHYHK.YRQMYRTEIR | |
Retrocopy | EAVAEKKKKA<PAVPETLKKKRRNFTELKIKHLRKKFAQKTLQKARRKLIYEKAKHYHKDYRQMYRTEIR |
Parental | MARMARKAGNFYVPGEPKLAFVIRIRGINGVSPK-VRKVLQLLRLRQIFNGAFVKLNKASINMLRIVEPY |
MA.MARKAGNFYVPGEPKL.FV.R.RGING..PK.VRKVLQLLRL.QIFNG.FVKLNK.SINMLRIVEPY | |
Retrocopy | MAQMARKAGNFYVPGEPKLVFVLRSRGING-EPK>VRKVLQLLRLCQIFNGTFVKLNKVSINMLRIVEPY |
Parental | IAWGYPNLKSVNELIYKRGYGKINKKRIALTDNTLIARSLGKY |
IAWGYPNLKSVN.LIYKRG.GKINK.RIALTDNTLIARSLGKY | |
Retrocopy | IAWGYPNLKSVNALIYKRGDGKINKQRIALTDNTLIARSLGKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |