RetrogeneDB ID: | retro_etel_1891 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_312062:12138..12798(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.4 % |
Parental protein coverage: | 89.52 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 5 |
Parental | FAELKIKRLRKKFAQKMLRMARRKLIYEKAKHYHKE-YRQMYRTEIRMARMARKAGNFYVPGEPKLAFVI |
FAELK.KRLRKKFA.KMLRMARRKL..EKA.H.H...YRQ..RT.I..ARM.RKAG.F..PGEP.LAFVI | |
Retrocopy | FAELKFKRLRKKFAPKMLRMARRKLL*EKAQHCHQL>YRQRDRTGIQVARMTRKAGGF*EPGEPTLAFVI |
Parental | RIRGINGVSPKVRKVLQLLR-LRQIFNGAFVK-LNKASINMLRIVEPYIAWG-YPNLK-SVNELIYKRGY |
.I..INGVSP.V.KVLQLL..LRQIF.G.FVK.....S...LR.VEP.IAWG..P.LK....EL.Y.... | |
Retrocopy | SISAINGVSPRVPKVLQLLG<LRQIFVGTFVK<ASRTSVSVLRVVEPSIAWG<HPHLK<AATELVYRLAD |
Parental | GKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVE |
GK..KKRI.LTDNTL.A.SLGKYGI.C.E.L.HE..T.GK.FKEANNFL..FK..SP.GGM..KTT.F.E | |
Retrocopy | GKTKKKRITLTDNTLTAGSLGKYGIFCTEHLMHEVCTAGKCFKEANNFLGSFK-*SP*GGMREKTTQFKE |
Parental | GGDAGNREDQINRLIRR |
GGDAGNRED.I.RLIRR | |
Retrocopy | GGDAGNRED*IARLIRR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |