RetrogeneDB ID: | retro_etel_2042 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_3895:0..494(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000003823 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000005656 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 92.77 % |
Parental protein coverage: | 66.53 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PGEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFN-GAFVKLNKASINMLRIVEPYIAWGYPNLKSVNE |
PGEPKLAFVIRIRGINGVSPKVRKVL.LLRL.Q.F..G.FVKLNKASINMLRIVEPYIAWGYPNLK.VNE | |
Retrocopy | PGEPKLAFVIRIRGINGVSPKVRKVLPLLRLCQVFK<GTFVKLNKASINMLRIVEPYIAWGYPNLKLVNE |
Parental | LIYKRGYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKK |
LIYKR.YGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTV.KRFKE.NNFLWPFKLSS.RGGMKK | |
Retrocopy | LIYKRDYGKINKKRIALTDNTLIARSLGKYGIICMEDLIHEIYTVRKRFKETNNFLWPFKLSSLRGGMKK |
Parental | KTTHFVEGGDAGNREDQINRLIRRMN |
KTTHFVEGGDAGNREDQI.RLIRRMN | |
Retrocopy | KTTHFVEGGDAGNREDQIHRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |