RetrogeneDB ID: | retro_meug_1535 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold44119:20661..21231(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LDHA | ||
Ensembl ID: | ENSMEUG00000001462 | ||
Aliases: | None | ||
Description: | lactate dehydrogenase A [Source:HGNC Symbol;Acc:6535] |
Percent Identity: | 89.47 % |
Parental protein coverage: | 56.89 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MASTVKDQLILNVLKEDQVPQNKITVVGVGAVGMACAISVLTKELADELALVDVIEDKLKGEMMDLQHGS |
MAS.VKDQLILNVLKE.QVPQNKITVVG.GAVGMACAIS.LTKELADEL.LVDVIEDKLKGEMM.LQHGS | |
Retrocopy | MASAVKDQLILNVLKENQVPQNKITVVGIGAVGMACAISILTKELADELTLVDVIEDKLKGEMMYLQHGS |
Parental | LFLKTPKIVSGKDYSVTANSKLVIVTAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLIVSNP |
LFLKTPKIVSGKDYS.TANSKLVIVT.GARQQEGES.LNLVQ.NVNIFKFIIPNIVKYSPNCKLLIVSNP | |
Retrocopy | LFLKTPKIVSGKDYSMTANSKLVIVTTGARQQEGESYLNLVQHNVNIFKFIIPNIVKYSPNCKLLIVSNP |
Parental | VDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYLMGERLGVHSLSCHGWV |
.DILTY.AWKLS..PKN.V.GSGCNLDSARF.YLMGERLGVHS.SCHG.. | |
Retrocopy | EDILTYAAWKLSDVPKNCVTGSGCNLDSARFCYLMGERLGVHSSSCHGFL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |