Parental gene:

RPS2, ENSTBEG00000006726

Aliases:None
Description:ribosomal protein S2 [Source:HGNC Symbol;Acc:10404]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2797:9598..10374(-)


>ENSTBEG00000006726
GCATTTGTCGCCATCGGGGACTACAATGGCCATGTTGGTTTGGGCGTGAAGTGCTCCAAGGAGGTGGCCACTGCCATCCG
AGGGGCCATCATCCTGGCCAAACTCTCCATTGTCCCAGTGCGGAGAGGCTACTGGGGGAACAAGATCGGCAAGCCCCACA
CTGTCCCTTGCAAGGTGACCGGCCGCTGTGGCTCTGTGTTGGTGCGCCTCATTCCTGCCCCCAGAGGCACTGGCATTGTC
TCTGCTCCTGTGCCCAAGAAGCTGCTGATGATGGCTGGCATCGATGACTGCTACACCTCAGCCCGGGGCTGCACTGCCAC
CCTGGGCAACTTCGCCAAGGCCACCTTTGATGCCATCTCCAAGACCTACAGTTATCTGACCCCTGACCTCTGGAAAGAGA
CCGTGTTCACCAAGTCTCCCTATCAGGAATTCACCGACCATCTCGTCAAGACCCACACCAGAGTCTCTGTGCAGAGGACC
CAGGCTCCAGCTGTGGCCACAACCTAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002549 ortholog_one2one 1 retrogene
retro_acar_57,
Callithrix jacchus ENSCJAG00000015267 possible_ortholog 15 retrogenes
retro_cjac_1482, retro_cjac_1585, retro_cjac_1609, retro_cjac_1712, retro_cjac_1964, retro_cjac_2201, retro_cjac_2255, retro_cjac_2284, retro_cjac_2361, retro_cjac_2493, retro_cjac_2620, retro_cjac_274, retro_cjac_317, retro_cjac_3741, retro_cjac_4194,
Felis catus ENSFCAG00000029191 possible_ortholog 6 retrogenes
retro_fcat_1245, retro_fcat_1328, retro_fcat_1606, retro_fcat_1610, retro_fcat_1737, retro_fcat_517,
Gorilla gorilla ENSGGOG00000009371 possible_ortholog 5 retrogenes
retro_ggor_129, retro_ggor_1391, retro_ggor_1428, retro_ggor_168, retro_ggor_390,
Microcebus murinus ENSMICG00000012765 ortholog_one2one 28 retrogenes
retro_mmur_1192, retro_mmur_1273, retro_mmur_1283, retro_mmur_1296, retro_mmur_1407, retro_mmur_1417, retro_mmur_1440, retro_mmur_153, retro_mmur_1613, retro_mmur_205, retro_mmur_210, retro_mmur_226, retro_mmur_230, retro_mmur_259, retro_mmur_266, retro_mmur_463, retro_mmur_672, retro_mmur_698, retro_mmur_742, retro_mmur_802, retro_mmur_824, retro_mmur_829, retro_mmur_875, retro_mmur_953, retro_mmur_966, retro_mmur_969, retro_mmur_981, retro_mmur_99,
Monodelphis domestica ENSMODG00000016077 possible_ortholog 1 retrogene
retro_mdom_536,
Nomascus leucogenys ENSNLEG00000008877 possible_ortholog 1 retrogene
retro_nleu_2895,
Otolemur garnettii ENSOGAG00000010098 possible_ortholog 19 retrogenes
retro_ogar_1051, retro_ogar_1120, retro_ogar_1205, retro_ogar_1557, retro_ogar_1821, retro_ogar_1835, retro_ogar_1837, retro_ogar_1851, retro_ogar_2101, retro_ogar_2164, retro_ogar_2313, retro_ogar_2648, retro_ogar_2817, retro_ogar_2842, retro_ogar_2965, retro_ogar_3109, retro_ogar_3177, retro_ogar_3180, retro_ogar_794,
Sarcophilus harrisii ENSSHAG00000015213 possible_ortholog 5 retrogenes
retro_shar_186, retro_shar_288, retro_shar_456, retro_shar_525, retro_shar_783,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_129 71.01 100.00
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2. retro_tbel_392 94.64 100.00
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3. retro_tbel_463 63.31 79.76
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4. retro_tbel_481 79.80 58.93
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5. retro_tbel_586 75.17 88.69
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6. retro_tbel_603 84.52 100.00
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7. retro_tbel_639 76.19 98.21
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8. retro_tbel_647 86.47 100.00
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9. retro_tbel_1023 81.98 100.00
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10. retro_tbel_1059 87.88 58.93
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11. retro_tbel_1105 82.94 100.00
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12. retro_tbel_1179 68.64 100.00
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13. retro_tbel_1444 95.86 100.00
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14. retro_tbel_1545 71.15 91.67
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15. retro_tbel_1615 89.29 100.00
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16. retro_tbel_1622 82.84 100.00
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17. retro_tbel_1786 93.45 100.00
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18. retro_tbel_1910 84.21 67.26
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19. retro_tbel_2294 95.24 100.00
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20. retro_tbel_2749 68.39 100.00
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21. retro_tbel_2786 71.60 100.00
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22. retro_tbel_2973 61.63 98.81
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23. retro_tbel_3179 68.12 94.64
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24. retro_tbel_3314 61.17 60.12
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25. retro_tbel_3509 67.31 61.31
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26. retro_tbel_3523 88.02 98.81
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27. retro_tbel_3682 88.05 94.05
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28. retro_tbel_3701 69.44 63.10
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29. retro_tbel_4373 89.88 98.81
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30. retro_tbel_4674 69.89 53.57
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Download FASTA sequences of all ENSTBEG00000006726 retrocopies