RetrogeneDB ID: | retro_mmur_875 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_116804:301..667(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSMICG00000012765 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 84.13 % |
Parental protein coverage: | 73.21 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | GNKIGKPH-TVPCKVTGRCGSVLVRLIPAPRG-TGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAK |
GNKI.KP..TVPCKVTGRCG.VLV.L.P.PRG.TGIVSAPVPKKL..MAGID.CYTSARGCTATLGNFAK | |
Retrocopy | GNKISKPP<TVPCKVTGRCGCVLVHLSPGPRG<TGIVSAPVPKKLPLMAGIDGCYTSARGCTATLGNFAK |
Parental | ATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSVQRT-QAPAVATT |
ATFDAISKT.S.LTPDLWKE.VF.KSPY.EFTDH.VKTH..VSVQRT.QAPAVATT | |
Retrocopy | ATFDAISKTCSCLTPDLWKEAVFAKSPY*EFTDHPVKTHASVSVQRT<QAPAVATT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |