RetrogeneDB ID: | retro_ogar_3109 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873720.1:1265843..1266403(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSOGAG00000010098 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 72.34 % |
Parental protein coverage: | 63.82 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | KSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSK |
.SLEE..L..LPIKESEIID.FLG.SLKDEVLKIM.VQKQ.R....TRFK.FVAIGDY.GHV..GVKCSK | |
Retrocopy | ESLEEV*LYFLPIKESEIIDIFLGTSLKDEVLKIMAVQKQARFSK*TRFKVFVAIGDYSGHVSVGVKCSK |
Parental | EVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTV-PCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLL |
EV.TAI.G..I..K.SIVPV.RGY.GNK.G..HTV..CKV.G.C.S.LVRLI.APRGTGIVS..VPKKL. | |
Retrocopy | EVTTAI*GTMIPSKISIVPVWRGY*GNKMGRYHTV<SCKVPGSCTSELVRLILAPRGTGIVSDHVPKKLP |
Parental | MMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFT |
.MAGI.D..TSAR.C..TLGNFAKA.FDA.S.T.SY..PDLWKETVFT | |
Retrocopy | IMAGINDYHTSARSCIVTLGNFAKASFDAMS*TFSYVIPDLWKETVFT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |