RetrogeneDB ID: | retro_tbel_3701 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_148850:34564..34884(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS2 | ||
Ensembl ID: | ENSTBEG00000006726 | ||
Aliases: | None | ||
Description: | ribosomal protein S2 [Source:HGNC Symbol;Acc:10404] |
Percent Identity: | 69.44 % |
Parental protein coverage: | 63.1 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | CGSVLVRLIPAPRGTGI-VSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW |
CGS.L..LI...R.TGI...A..PKKLL.MA.I.D...SARG.TATL.NFAK.TFDAI.KTYSYLTP.LW | |
Retrocopy | CGSELMHLINSSRSTGI<LLASMPKKLLLMATINDYFISARGYTATLDNFAKTTFDAIYKTYSYLTPSLW |
Parental | KETVFTKSPYQEFTDHLVKTHTR-VSVQRTQAPAVATT |
KET.FTKSPY.EFT.HL.KTHTR....QRTQ.PAVA.T | |
Retrocopy | KETKFTKSPYWEFTEHLDKTHTRDFFMQRTQTPAVART |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |